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Delile H., A. M. Dendievel, A. Yari, M. Masson, C. Miège, B. Mourier, M. Coquery – 2022.  Legacy-micropollutant contamination levels in major river basins based on findings from the Rhône Sediment Observatory, Hydrological Processes, SI Research and observatory catchments: the legacy and the future, 36:e14511, DOI: 10.1002/hyp.14511

Evrard O., P.V. G. Batista, J. Company, A. Dabrin, A. Foucher, A. Frankl, J. García‑Comendador, A. Huguet, N. Lake, I. Lizaga, N. Martínez‑Carreras, O. Navratil, C. Pignol, V. Sellier – 2022. Improving the design and implementation of sediment fingerprinting studies: summary and outcomes of the TRACING 2021 Scientific School. J Soils Sediments, DOI: 10.1007/s11368-022-03203-1


Bégorre C., A. Dabrin, A. Morereau, H. Lepage, B. Mourier, M. Masson, F. Eyrolle, M. Coquery – 2021. Relevance of using the non-reactive geochemical signature in sediment core to estimate historical tributary contributions. Journal of Environmental Management 292, 112775.

Bonnaud B., C. Miège, A. Daval, V. Fauvelle, N. Mazzella 2021. Determination of diffusion coefficients in agarose and polyacrylamide gels for 112 organic chemicals for passive sampling by organic Diffusive Gradients in Thin films (o-DGT). Environmental Science and Pollution Research,

Morvannou A., M. Masson, M. Gautier, S. Bisone, L. Richard, C. Boutin, N. Forquet – 2021. Fate of phosphorus from treated wastewater in soil-based constructed wetlands. Science of the Total Environment, 151589.

Bride E., Heinisch S., Bonnefille B., Guillemain C., Margoum C. – 2021. Suspect screening of environmental contaminants by UHPLC-HRMS and transposable Quantitative Structure-Retention Relationship modelling. J. Hazardous Materials, 409,124652. DOI: 10.1016/j.jhazmat.2020.124652

Dabrin A., Bégorre C., Bretier M., Dugué V., Masson M., Le Bescond C., Le Coz J., Coquery M. – 2021. Reactivity of particulate element concentrations: apportionment assessment of suspended particulate matter sources in the Upper Rhône River, France. J. Soils & Sediment. 21, 1256–1274. DOI: 10.1007/s11368-020-02856-0

Mathon B., A. Dabrin, I. Allan, S. Lardy-Fontan, A. Togola, J.-P. Ghestem, C. Tixier, J.-L. Gonzalez, E. Alasonati, M. Ferreol, L. Dherret, A. Yari, L. Richard, A. Moreira, M. Eon, B. Delest, C. Pollono, C. Munschy, E. Noel-Chery, M. El Mossaoui, P.-F. Staub, N. Mazzella, C. Miège. 2021 – Les échantillonneurs intégratifs passifs, des outils pertinents pour améliorer la surveillance réglementaire de la qualité chimique des milieux aquatiques ? Techniques Sciences Méthodes, 116 (6), 57-71.

Soulier C., V. Boiteux, P. Candido, E. Caupos, M. Chachignon, G. Couturier, X. Dauchy, M.-H. Devier, M. Esperanza, A. Fildier, C. Gardia-Parege, R. Guibal, J. Le Roux, G. Leroy, F. Lestremau, S. Lissalde, N. Noyon, A. Piram, E. Vulliet, C. Margoum. 2021 – La spectrométrie de masse haute résolution pour la recherche de micropolluants organiques dans l’environnement. Techniques Sciences Méthodes, 116 (6), 43-54.

Mathon B., Ferreol M., Coquery M., Choubert J.M., Chovelon J.M., Miège C. – 2021. Direct photodegradation of 36 organic micropollutants under simulated solar radiation: comparison with free-water surface constructed wetland and influence of chemical structure. J Hazardous Materials, 407, 124801, DOI: 10.1016/j.jhazmat.2020.124801

Mathon B., M. Coquery, Z. Liu, Y. Penru, A. Guillon, M. Esperanza, C. Miege, J.-M. Choubert. – 2021. Ozonation of 47 organic micropollutants in secondary treated municipal effluents: Direct and indirect kinetic reaction rates and modelling. Chemosphere, 262, 127969, DOI: 10.1016/j.chemosphere.2020.127969

Cossa D., A Mucci, S. Guédron, M. Coquery, O. Radakovitch, R. Escoube, S. Campillo, S. Heussner – 2021. Mercury accumulation in the sediment of the Western Mediterranean abyssal plain: A reliable archive of the late Holocene. Geochimica et Cosmochimica Acta, 309, 1–15,

Gestin, O., Lacoue-Labarthe, T., Coquery, M., Delorme, N., Garnero, L., Dherret, L., Ciccia, T., Geffard, O., Lopes, C. – 2021. One and multi-compartments toxico-kinetic modeling to understand metals’ organotropism and fate in Gammarus fossarum. Environment International, 156, 106625, DOI: 10.1016/j.envint.2021.106625

Diamond, J. S., Bernal, S., Boukra, A., Cohen, M. J., Lewis, D., Masson, M., (…), Pinay, G. – 2021. Stream network variation in dissolved oxygen: Metabolism proxies and biogeochemical controls. Ecological Indicators, 131, 108233.

Lecrivain N., Clement B., Dabrin A., Seigle-Ferrand J., Bouffard D., Naffrechoux E., Frossard V.  – 2021. Water-level fluctuation enhances sediment and trace metal mobility in lake littoral. Chemosphere, 264. DOI: 10.1016/j.chemosphere.2020.128451

Jabiol, J., Chauvet, E., Guerold, F., Usseglio-Polatera, P., Artigas, J., Margoum, C., Le Dreau, M., Mazzella, N., Gouy, V. – 2021. Water quality, communities and ecosystem process alterations in agricultural streams: implications for biomonitoring. Environmental Science and Pollution Research. doi:10.1007/s11356-021-16925-5

Kergoat L., Besse-Hoggan P., Lerembourre M., Beguet J., Devers M., Martin-Laurent F., Masson M., Morin S., Roinat A., Pesce S., Bonnineau C. – 2021. Environmental concentrations of sulfonamides can alter bacterial structure and induce diatom deformities in freshwater biofilm communities, Frontiers in Microbiology, 12:643719, DOI: 10.3389/fmicb.2021.643719

Gouy, V., Liger, L., Ahrouch, S., Bonnineau, C., Carluer, N., Chaumot, A., Coquery, M., Dabrin, A., Margoum, C., Pesce, S. 2021. Ardières-Morcille in the Beaujolais, France: A research catchment dedicated to study of the transport and impacts of diffuse agricultural pollution in rivers. Hydrological Processes, 35: e14384.

Bonnineau C., Artigas J., Chaumet B., Dabrin A., Fabure J., Ferrari B.J.D., Lebrun J.D., Margoum C., Mazzella N., Miege C., Morin S., Uher E., Babut M., Pesce S. – 2021. Role of biofilms in contaminant bioaccumulation and trophic transfer in aquatic ecosystems: current state of knowledge and future challenges. Rev. Environ. Contam. Toxicol. 253, 115-153.

Schulze, B., van Herwerden, D., Allan, I., (…), Merel, S., Vrana, B., (…) Margoum, C., Mascolo, G., Mebold, E., Menger, F., Miège, C., Meijer, J., Moilleron, R., (…), Vulliet, E., Young, R., Samanipour, S. –  2021. Inter-laboratory mass spectrometry dataset based on passive sampling of drinking water for non-target analysis. Scientific Data 8, 223.

Tardy V, Bonnineau C, Bouchez A, Miege C, Masson M, Jeannin P, Pesce S. –  2021. A pilot experiment to assess the efficiency of pharmaceutical plant wastewater treatment and the decreasing effluent toxicity to periphytic biofilms. J. Hazardous Material, 411, 125121.


Bretier M., Dabrin A., Billon G., Mathon B., Miège C., Coquery M.  – 2020. To what extent can the biogeochemical cycling of mercury modulate the measurement of dissolved mercury in surface freshwaters by passive sampling? Chemosphere, 248, 126006,

Delile H., Masson M., Miège C., Le Coz J., Poulier G., Le Bescond C., Radakovitch O., Coquery M. – 2020.  Hydro-climatic drivers of land-based organic and inorganic particulate micropollutant fluxes: the regime of the largest river water inflow of the Mediterranean Sea. Water Research, 185, 116067, DOI:10.1016/j.watres.2020.116

Dendievel, A.M, Mourier, B., Dabrin, A., Delile, H., Coynel, A., Gosset, A., Liber, J., Berger, J.F., Bedell, J.F. – 2020.  Metal pollution trajectories and mixture risk assessed by combining dated cores and subsurface sediments along a major European river (Rhône River, France). Environment International, 144. DOI: 10.1016/j.envint.2020.106032

Dendievel, A.M., Mourier, B., Dabrin, A., Barra, A., Begorre, C., Delile, H., Hammada, M., Lardaux, G., Berger, J.F 2020 – Dataset of natural metal background levels inferred from pre-industrial palaeochannel sediment cores along the Rhône River (France). Data in Brief, 32. DOI: 10.1016/j.dib.2020.106256

Lepage H., Launay M., Le Coz J., Angot H., Miège C., Gairoard S., Radakovitch O., Coquery M. – 2020. Impact of dam flushing operations on sediment dynamics and quality in the upper Rhône River, France. Journal of Environmental Management, 255, 109886,

Montecinos M.,  Coquery, M., Alsina M.A., Bretier M., Gaillard J.F., Dabrin A., Pastén, P. – 2020. Partitioning of copper at the confluences of Andean rivers. Chemosphere, 259, 127318, DOI: 10.1016/j.chemosphere.2020.127318

Pesce S., Campiche S., Casado-Martinez C., Ahmed A.M., Bonnineau C., Dabrin A., Lyautey E., Ferrari B.J.D. – 2020. Towards simple tools to assess functional effects of contaminants on natural microbial and invertebrate sediment communities. Environmental Science and Pollution Research, 27/6, 6680-6689, DOI: 10.1007/s11356-019-07331-z

Salvador, A., Carrere, R., Ayciriex, S., Margoum, C., Leblanc, Y., Lemoine, J. – 2020. Scout-multiple reaction monitoring: A liquid chromatography tandem mass spectrometry approach for multi-residue pesticide analysis without time scheduling. Journal of Chromatography A, 1621 DOI: 10.1016/j.chroma.2020.461046

Villarin M.C., Merel S. – 2020. Paradigm shifts and current challenges in wastewater management. Journal of Hazardous Materials, 390, 122139, DOI: 10.1016/j.jhazmat.2020.122139


Bretier M., Dabrin A., Bessueille-Barbier F., Coquery M. – 2019. The impact of dam flushing event on dissolved trace elements concentrations: Coupling integrative passive sampling and discrete monitoring, Science of the Total Environment, 656, 433-446, DOI: 10.1016/j.scitotenv.2018.11.303

Poulier G., Launay M., Le Bescond C., Thollet F., Coquery M., Le Coz J. – 2019. Combining flux monitoring and estimation to establish annual budgets of suspended particulate matter and associated pollutants in the Rhône River from Lake Geneva to the Mediterranean Sea, Science of the Total Environment, 658, 457–473, DOI: 10.1016/j.scitotenv.2018.12.075

Yari, A., Dabrin, A., Coquery, M. – 2019. Méthodologie d’évaluation des tendances temporelles de contamination dans les sédiments et les matières en suspension des systèmes aquatiques continentaux. Techniques Sciences Méthodes, 114 (6), 71-84.

Mathon, B., Coquery, M., Miege, C., Vandycke, A., Choubert, J.M. – 2019. Influence of water depth and season on the photodegradation of micropollutants in a free-water surface constructed wetland receiving treated wastewater. Chemosphere, 235, 260-270,

Gentes, S., Coquery, M., Vigouroux, R., Hanquiez, V., Allard, L., Maury Brachet, R. – 2019. Application of the European Water Framework Directive: Identification of reference sites and bioindicator fish species for mercury in tropical freshwater ecosystems (French Guiana). Ecological Indicators, vol. 106, 105468, DOI: 10.1016/j.ecolind.2019.105468

Lepage, H., Masson, M., Delanghe, D., Le Bescond, C. – 2019. Grain size analyzers: results of an intercomparison study. SN Applied Sciences, 1 :1100, DOI : 10.1007/s4245 2-019-1133-9

Pesce, S., Bonnimeau, C., Coquery, M., Dabrin, A., Degli-Esposti, D., Gouy, V., Masson, M., Mendoza-Lera, C., Neyra, M., Yari, A. – 2019. Recommandations d’un collectif franco-suisse d’experts pour une meilleure évaluation de la qualité écotoxicologique des sédiments par l’étude des communautés benthiques. Sciences Eaux et Territoires, n° Hors Série 55, 1-9. accès

Becouze-Lareure C., A. Dembele, M. Coquery, C. Cren-Olive, j.-l. Bertrand-Krajewski – 2019. Assessment of 34 dissolved and particulate organic and metallic micropollutants discharged at the outlet of two contrasted urban catchments. Science of the Total Environment. 651: 1810–1818, DOI: 10.1016/j.scitotenv.2018.10.042

Launay M., Dugué V., Faure J.-B., Coquery M., Camenen B., Le Coz J. – 2019. Numerical modelling of the suspended particulate matter dynamics in a regulated river network, Science of the Total Environment, 665, 591-605, DOI: 10.1016/j.scitotenv.2019.02.015

Launay M., J. Le Coz, S. Diouf, B. Camenen, F. Thollet, M Coquery – 2019. Re-évaluation des apports moyens de matières en suspension de l’Arve au Rhône. La Houille Blanche, 2, 89–100.

Vignati D.A.L., Ferrari B.J.D., Roulier J.-L., Coquery M., Szalinska E., Bobrowski A., Czaplicka, A., Kownacki A., Dominik J. – 2019. Chromium bioavailability in aquatic systems impacted by tannery wastewaters. Part 1: Understanding chromium accumulation by indigenous chironomids. Science of the Total Environment. 653: 401-408, DOI: 10.1016/j.scitotenv.2018.10.259

Ferrari B.J.D., Vignati D.A.L., Roulier J.-L., Coquery M., Szalinska E., Bobrowski A., Czaplicka, A., Dominik J. – 2019. Chromium bioavailability in aquatic systems impacted by tannery wastewaters. Part 2: New insights from laboratory and in situ testing with Chironomus riparius Meigen (Diptera, Chironomidae). Science of the Total Environment. 653: 1–9, DOI: 10.1016/j.scitotenv.2018.10.258


Masson M., Angot H., Le Bescond C., Launay M., Dabrin A., Miege C., Le Coz J., Coquery, M. – 2018. Sampling of suspended particulate matter using particle traps in the Rhône River: Relevance and representativeness for the monitoring of contaminants. Science of the Total Environment, 637-638, 538-549, DOI:

Martin A., C. Margoum, A. Jolivet, A. Assoumani, B. El Moujahd, J. Randon, M Coquery, Calibration of silicone rubber rods as passive samplers for pesticides at two different flow velocities: modelling of sampling rates under water boundary layer and polymer control, Environmental Toxicology and Chemistry, 2018, 37, 4, 1208–1218, DOI: 10.1002/etc.4050

Morin NAO, N Mazzella, HPH Arp, J Randon, J Camilleri, L Wiest, M Coquery, C Miège, Kinetic accumulation processes and models for 43 micropollutants in “pharmaceutical” POCIS, Science of The Total Environment, 2018, 615, 197-207, ISSN 0048-9697,

Pesce, S., Perceval, O., Bonnineau, C., Casado Martinez, C., Dabrin, A., Lyautey, E., Naffrechoux, E., Ferrari, B.J.D. – 2018. Looking at biological community level to improve ecotoxicological assessment of freshwater sediments: Report on a First French-Swiss Workshop. Environmental Science and Pollution Research, vol. 25, n° 1, p. 970-974.

Pesce S., Lambert A.-S., Morin S., Foulquier A., Coquery M., Dabrin A. – 2018. Experimental warming differentially influences the vulnerability of phototrophic and heterotrophic periphytic communities to copper toxicity, Frontiers in Microbiology, 9, 1424, DOI: 10.3389/fmicb.2018.01424

Penru, Y., Choubert, J.M., Mathon, B., Guillon, A., Esperanza, M., Cretollier, C., Dherret, L., Daval, A., Masson, M., Lagarrigue, C., Miege, C., Coquery, M. – 2018. Élimination de micropolluants des eaux résiduaires urbaines par ozonation : retour d’expérience de la station d’épuration de Sophia Antipolis. Techniques Sciences Méthodes, 6, 71-83

Rossi, F., Pesce, S., Mallet, C., Margoum, C., Chaumot, A., Masson, M., Artigas, J. – 2018. Interactive effects of pesticides and nutrients on microbial communities responsible of litter decomposition in streams. Frontiers in Microbiology, 9, 2437.

Ahmed, A.M., Lyautey, E., Bonnineau, C., Dabrin, A., Pesce, S. – 2018. Environmental concentrations of copper, alone or in mixture with arsenic, can impact river sediment microbial community structure and functions.  Frontiers in Microbiology, 9, 1852.

Papias S., Masson M., Pelletant S., Prost-Boucle S., Boutin C. – 2018.  In situ continuous monitoring of nitrogen with ion-selective electrodes in a constructed wetland receiving treated wastewater: an operating protocol to obtain reliable data. Water Science and Technology, 77.6, 1706-1713.

Le Bescond, C., Thollet, F., Poulier, G., Gairoard, S., Lepage, H., Branger, F., Jamet, L., Raidelet, N., Radakovitch, O., Dabrin, A., Coquery, M., Le Coz, J. – 2018. Des flux d’eau aux flux de matières en suspension et de contaminants associés : gestion d’un réseau de stations hydro-sédimentaires sur le Rhône. Houille Blanche-Revue Internationale de l eau, n° 3, p. 63-70.

Penru, Y., Choubert, J.M., Mathon, B., Guillon, A., Esperanza, M., Cretollier, C., Dherret, L., Daval, A., Masson, M., Lagarrigue, C., Miege, C., Coquery, M. – 2018. Élimination de micropolluants des eaux résiduaires urbaines par ozonation : retour d’expérience de la station d’épuration de Sophia Antipolis. Techniques Sciences Méthodes, 6, 71-83


Arambourou H, Queau H, Dabrin A, Neuzeret D, Chaumot A. Use of Gammarus fossarum (Amphipoda) embryo for toxicity testing: a case study with cadmium. Environmental Toxicology and Chemistry. 2017;9999(9999):1-8. doi:

Assoumani A, Margoum C, Lombard A, Guillemain C, Coquery M. How do PDMS-coated stir bars used as passive samplers integrate concentration peaks of pesticides in freshwater? Environmental Science and Pollution Research. 2017;24(8):6844-52. doi:

Lambert, A.S., Dabrin, A., Foulquier A., Morin, S., Rosy C., Coquery, M., Pesce, S. Influence of temperature in pollution-induced community tolerance approaches used to assess effects of copper on freshwater phototrophic periphyton. Science of the Total Environment, 2017;607-608, 1018-1025, DOI: 10.1016/j.scitotenv.2017.07.035

Morin S, Lambert AS, Planes Rodriguez E, Dabrin A, Coquery M, Pesce S. Changes in copper toxicity towards diatom communities with experimental warming. Journal of Hazardous Materials. 2017;334:223-32. doi:

Mathon B, Coquery M, Miege C, Penru Y, Choubert JM. Removal efficiencies and kinetic rate constants of xenobiotics by ozonation in tertiary treatment. Water Science and Technology. 2017;75(12):2737-46. doi:

Mathon  B., Coquery, M., Miège C., Choubert J.M. – 2017. Rôle de la photodégradation dans l’élimination des micropolluants organiques au sein d’une zone de rejet végétalisée de type bassin. Techniques Sciences Méthodes, n° 12, p. 127-155

Choubert JM, Martin Ruel S, Miege C, Coquery M. Rethinking micropollutant removal assessment methods for wastewater treatment plants; how to get more robust data? Water Science and Technology. 2017;75(12):2964-72. doi:

Bisone S, Gautier M, Masson M, Forquet N. Influence of loading rate and modes of infiltration of treated wastewater in soil-based constructed wetland. Environmental Technology. 2017;38:163-74. doi:

Abarca M, Guerra P, Arce G, Montecinos M, Escauriaza C, Coquery M, Pasten P. Response of suspended sediment particle size distributions to changes in water chemistry at an Andean mountain stream confluence receiving arsenic rich acid drainage. Hydrological Processes. 2017;31:296-307. doi:

Arce G, Montecinos M, Guerra P, Escauriaza C, Coquery M, Pastén P. Enhancement of particle aggregation in the presence of organic matter during neutralization of acid drainage in a stream confluence and its effect on arsenic immobilization. Chemosphere, 2017; 180, 574-583, DOI: 10.1016/j.chemosphere.2017.03.107

Ciliberti A., Chaumot A., Recoura Massaquant R., Chandesris A., François A., Coquery M., Ferréol M., Geffard O. Caged Gammarus as biomonitors identifying thresholds of toxic metal bioavailability that affect gammarid densities at the French national scale. Water Research, 2017; 118, 131-140, DOI: 10.1016/j.watres.2017.04.031